Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907873.1_cds_XP_016457964.1_51634
CDS Infomation

[gene=LOC107781737] [db_xref=GeneID:107781737] [protein=subtilisin-like protease SBT5.6] [protein_id=XP_016457964.1] [location=join(37876..37953,38053..38245,38449..38628,39101..39212,40941..41502,41659..41756,41865..42222,42317..42530,42733..43268)] [gbkey=CDS]
Sequence

ATGAAGAATTTTTACATATTCTCTTTTCTTCTCCTTCTCCTTCTCCTTCCCATCTTGGCT
TCATGTCATGAAAAACAGGTTTATATAGTGTATTTTGGAGGACATAATGGGGAGAGAGCA
TTGCATGAGATTGAAGAAAACCATCACTCATATCTCATGTCAGTGAAGGAAAGTGAAGAA
GAAGCCAGATCTTCCCTTATTTACAGTTACAAACATAGCATCAATGGCTTTGCTGCACTT
CTCACCCCACATGAAGCCTCCAAGTTATCTGAATTGGAAGAAGTGGTATCGGTATATAAA
AGCGAGCCAAGGAAATACAGATTGCAAACAACAAGGTCATGGGAATTTTCTGGAGTGGAA
GAGTCAGTGCAACCAAATTCCTTGAACAAGGATGACTTGCTATTGAAAGCCAGATATGGC
AAAGATGTCATTATTGGCGTTCTTGACAGCGGGCTATGGCCAGAATCTAAGAGCTTTAGT
GATGAAGGGTTGGGACCGATTCCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCT
TTCAACTCTTCAAACTGTAATAAGAAAATAATTGGAGCTAGGTACTATATCAAAGGTTAC
GAGCAATATTATGGCCCTCTAAACCGAACTCTGGATTATCTATCTCCACGAGACAAGGAT
GGACATGGAACTCATACATCCTCAACAGCAGGAGGCAGAAAGGTTCCAAACGTCTCTGCC
ATTGGTGGCTTTGCATCTGGCACCGCCTCGGGTGGCGCACCACTCGCACGGCTAGCAATG
TACAAAGTCTGCTGGGCTATTCCGAAGGAGGGGAAAGAAGATGGAAACACTTGCTTTGAT
GAAGACATGTTAGCAGCAATGGATGATGCTATTGCAGATGGTGTTGATGTTATTAGTATT
TCTATTGGAACAAAAGAACCTCAGCCCTTTGATCAAGATAGCATTGCAATTGGAGCACTT
CATGCGGTGAAGAAAAACATTGTTGTATCTTGTAGTGCTGGAAATTCAGGACCTGCACCT
TCTACATTGTCTAATACAGCTCCTTGGATTATCACTGTTGGTGCTAGCAGTGTTGACAGG
GCATTCTTGGCACCTGTTATCCTAGGAAATGGCAAGAAATTTATGGGACAAACAGTTACA
CCTTACAAGCTCGAGAAGAAGATGTACCCTCTAGTTTATGCAGGACAAGTAATCAACTCT
AACGTAACCAAAGATGTAGCAGGGCAATGTTTACCAGGTTCCCTTTTGCCGAAGAAGGCC
AAGGGGAAGATAGTAATATGCTTGAGAGGGAACGGGACTAGAGTAGGAAAAGGCGGAGAG
GTGAAAAGGGCAGGAGGAATTGGTTACATACTGGGAAATAATAAAGCAAATGGAGCTGAA
TTAGTAGCTGATCCTCACTTTCTTCCAGCCACTGCAGTGGATTATAAAAGTGCAGTTCAG
ATTCTCAATTACATCAATTCTACAAAGTCCCCAGTGGCATATATTGTCCCAGCTAAAACA
GTATTGCATTCTAAACCAGCACCTTACATGGCCTCCTTCACTAGTAGAGGTCCAAGTGCA
GTTGCGCCCCATATCCTCAAGCCTGATATCACGGCACCAGGGCTAAATATATTGGCAGCA
TGGAGTGGCGGATCTTCCCCCACGAAGCTAGATATCGATGATCGTGTGGTTGAGTATAAC
ATAATCTCAGGTACTTCCATGTCTTGCCCACATGTCGGTGGTGCCGCTGCACTTTTGAAG
GCTATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTTATAACCTCAGCTGGA
TTACGAAATAATGTTGGTGAGCAAATAACGGATGCATCAGGGAAGCCAGCAGATCCATTC
CAATTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTATACGAC
GCTTCCTACCAAGACTATCTTCTCTTCCTTTGTGCTTCTGGTATTAAGGATCTTGACAAA
TCCTTCAAGTGTCCCAAGAAATCACATTTGCCTAACAGCCTAAATTACCCATCTCTAGCT
ATTCCTAATCTCAATGGTACTGTTACTGTTAGCAGAAGATTAACAAATGTTGGTGGGCCA
AAGAGTGTGTACTTTGCCAGTGCTAAACCTCCACTGGGATTCTCTGTTGAGATTTCTCCT
CCCGTCTTGTCTTTTAAGCGCGTTGGCTCGAAGAGGACGTTCACTATTACAGTGAAAGCT
CGCAGTGATATGAGTGACAGTATTCCGAAAGATCAATATGTGTTTGGATGGTATTCCTGG
AATGATGGAATCCATAATGTTAGGAGTCCAATTGCAGTAAAATTGGCATAA

Peptide Sequence

PEP ID

XP_016457964.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.6 [Nicotiana tabacum]
Sequence

MKNFYIFSFLLLLLLLPILASCHEKQVYIVYFGGHNGERALHEIEENHHSYLMSVKESEE
EARSSLIYSYKHSINGFAALLTPHEASKLSELEEVVSVYKSEPRKYRLQTTRSWEFSGVE
ESVQPNSLNKDDLLLKARYGKDVIIGVLDSGLWPESKSFSDEGLGPIPKSWKGICQSGDA
FNSSNCNKKIIGARYYIKGYEQYYGPLNRTLDYLSPRDKDGHGTHTSSTAGGRKVPNVSA
IGGFASGTASGGAPLARLAMYKVCWAIPKEGKEDGNTCFDEDMLAAMDDAIADGVDVISI
SIGTKEPQPFDQDSIAIGALHAVKKNIVVSCSAGNSGPAPSTLSNTAPWIITVGASSVDR
AFLAPVILGNGKKFMGQTVTPYKLEKKMYPLVYAGQVINSNVTKDVAGQCLPGSLLPKKA
KGKIVICLRGNGTRVGKGGEVKRAGGIGYILGNNKANGAELVADPHFLPATAVDYKSAVQ
ILNYINSTKSPVAYIVPAKTVLHSKPAPYMASFTSRGPSAVAPHILKPDITAPGLNILAA
WSGGSSPTKLDIDDRVVEYNIISGTSMSCPHVGGAAALLKAIHPTWSSAAIRSALITSAG
LRNNVGEQITDASGKPADPFQFGGGHFRPSKAADPGLVYDASYQDYLLFLCASGIKDLDK
SFKCPKKSHLPNSLNYPSLAIPNLNGTVTVSRRLTNVGGPKSVYFASAKPPLGFSVEISP
PVLSFKRVGSKRTFTITVKARSDMSDSIPKDQYVFGWYSWNDGIHNVRSPIAVKLA

Transcript Sequence

Gene sequence data has not been registered.